Type: Package
Package: CroptimizR
Title: A Package to Estimate Parameters of Crop Models
Version: 1.0.0
Date: 2026-01-31
Authors@R: c(
    person("Samuel", "Buis", , "samuel.buis@inrae.fr", role = c("aut", "cre"),
           comment = c(ORCID = "0000-0002-8676-5447")),
    person("Patrice", "Lecharpentier", , "patrice.lecharpentier@inrae.fr", role = "aut",
           comment = c(ORCID = "0000-0002-4044-4322")),
    person("Remi", "Vezy", , "remi.vezy@cirad.fr", role = "aut",
           comment = c(ORCID = "0000-0002-0808-1461")),
    person("Michel", "Giner", , "michel.giner@cirad.fr", role = "aut",
           comment = c(ORCID = "0000-0002-9310-2377")),
    person("Drew", "Holzworth", role = "ctb"),
    person("Henrike", "Mielenz", role = "ctb",  comment = "AgMIP Calibration Protocol design"),
    person("Taru", "Palosuo", role = "ctb",  comment = "AgMIP Calibration Protocol design"),
    person("Thomas", "Robine", role = "ctb"),
    person("Sabine", "Seidel", role = "ctb",  comment = "AgMIP Calibration Protocol design"),
    person("Peter", "Thorburn", role = "ctb",  comment = "AgMIP Calibration Protocol design"),
    person("Daniel", "Wallach", role = "ctb",  comment = "AgMIP Calibration Protocol design"),
    person("Theo", "Vailhere", role = "ctb"),
    person("Julie", "Constantin", role = "rev"),
    person("Benjamin", "Dumont", role = "rev")
  )
Description: The purpose of CroptimizR is to provide functions for
        estimating crop model parameters from observations of their
        simulated variables. This process is often referred to as
        calibration. For that, it offers a generic framework for
        linking crop models with up-to-date and ad-hoc algorithms, as
        well as a choice of goodness-of-fit criteria and additional
        features adapted to the problem of crop model calibration
        including AgMIP calibration protocol and user-defined
        sequential multi-step workflow. It facilitates the comparison
        of different types of methods on different models.
License: file LICENSE
URL: https://github.com/SticsRPacks/CroptimizR,
        https://doi.org/10.5281/zenodo.4066451
BugReports: https://github.com/SticsRPacks/CroptimizR/issues
Depends: R (>= 4.2.0)
Imports: BayesianTools, crayon, CroPlotR, dplyr, ggplot2, lhs,
        lifecycle, lubridate, methods, nloptr, purrr, readxl, rlang,
        tibble, tictoc, tidyr
Suggests: ApsimOnR, covr, devtools, doParallel, gridExtra, knitr,
        openxlsx, rmarkdown, spelling, SticsOnR, SticsRFiles (>=
        1.1.3), testthat (>= 2.1.0)
VignetteBuilder: knitr
Remotes: github::cran/Matrix@1.6-5, github::hol430/ApsimOnR,
        github::SticsRPacks/CroPlotR@*release,
        github::SticsRPacks/SticsOnR@*release
ByteCompile: true
Encoding: UTF-8
Language: en-US
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.3
Config/pak/sysreqs: cmake make libicu-dev libuv1-dev libssl-dev
        zlib1g-dev
Repository: https://sticsrpacks.r-universe.dev
Date/Publication: 2026-04-03 12:22:37 UTC
RemoteUrl: https://github.com/SticsRPacks/CroptimizR
RemoteRef: HEAD
RemoteSha: 3a10fb358d72af6ce3af9eeb79f6814e8b11813b
NeedsCompilation: no
Packaged: 2026-07-02 07:55:12 UTC; root
Author: Samuel Buis [aut, cre] (ORCID: <https://orcid.org/0000-0002-8676-5447>),
  Patrice Lecharpentier [aut] (ORCID:
    <https://orcid.org/0000-0002-4044-4322>),
  Remi Vezy [aut] (ORCID: <https://orcid.org/0000-0002-0808-1461>),
  Michel Giner [aut] (ORCID: <https://orcid.org/0000-0002-9310-2377>),
  Drew Holzworth [ctb],
  Henrike Mielenz [ctb] (AgMIP Calibration Protocol design),
  Taru Palosuo [ctb] (AgMIP Calibration Protocol design),
  Thomas Robine [ctb],
  Sabine Seidel [ctb] (AgMIP Calibration Protocol design),
  Peter Thorburn [ctb] (AgMIP Calibration Protocol design),
  Daniel Wallach [ctb] (AgMIP Calibration Protocol design),
  Theo Vailhere [ctb],
  Julie Constantin [rev],
  Benjamin Dumont [rev]
Maintainer: Samuel Buis <samuel.buis@inrae.fr>